***** Format Files ******
copy file:/opt/job/P11362/P11362/P11362.pdb
***** End Format Files ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 20000 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 32 seqs
  -Similar names: Removed 147 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 1 seqs
Selected 19820 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 13089 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 6120 seqs
Selected 611 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:196 196 196 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 611 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 611 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 3 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 608 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 608 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 608 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 608 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
***** JET analysis ******
Alignment file:/opt/job/P11362/P11362/P11362_A.fasta
Analysis of sequence: A
format ok
Selected 608 sequences before filtering
Filtering sequences (Iteration 1):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Filtering sequences (Iteration 2):
  -Identity: Removed 0 seqs
  -Redundancy: Removed 0 seqs
  -Similar names: Removed 0 seqs
  -Gaps: Removed 0 seqs
  -Length: Removed 0 seqs
  -EValue: Removed 0 seqs
  -CPU Load: Removed 0 seqs
Selected 608 after filtering
Nb alignments:24 Nb sequences:24
Final iterated blast partition:195 195 195 23
proportion=0.5
selected partition: 6 6 6 6
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_0.fasta -clw -out /opt/job/P11362/P11362/P11362_0.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_1.fasta -clw -out /opt/job/P11362/P11362/P11362_1.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_2.fasta -clw -out /opt/job/P11362/P11362/P11362_2.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_3.fasta -clw -out /opt/job/P11362/P11362/P11362_3.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_4.fasta -clw -out /opt/job/P11362/P11362/P11362_4.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_5.fasta -clw -out /opt/job/P11362/P11362/P11362_5.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_6.fasta -clw -out /opt/job/P11362/P11362/P11362_6.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_7.fasta -clw -out /opt/job/P11362/P11362/P11362_7.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_8.fasta -clw -out /opt/job/P11362/P11362/P11362_8.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_9.fasta -clw -out /opt/job/P11362/P11362/P11362_9.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_10.fasta -clw -out /opt/job/P11362/P11362/P11362_10.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_11.fasta -clw -out /opt/job/P11362/P11362/P11362_11.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_12.fasta -clw -out /opt/job/P11362/P11362/P11362_12.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_13.fasta -clw -out /opt/job/P11362/P11362/P11362_13.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_14.fasta -clw -out /opt/job/P11362/P11362/P11362_14.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_15.fasta -clw -out /opt/job/P11362/P11362/P11362_15.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_16.fasta -clw -out /opt/job/P11362/P11362/P11362_16.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_17.fasta -clw -out /opt/job/P11362/P11362/P11362_17.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_18.fasta -clw -out /opt/job/P11362/P11362/P11362_18.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_19.fasta -clw -out /opt/job/P11362/P11362/P11362_19.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_20.fasta -clw -out /opt/job/P11362/P11362/P11362_20.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_21.fasta -clw -out /opt/job/P11362/P11362/P11362_21.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_22.fasta -clw -out /opt/job/P11362/P11362/P11362_22.aln
Exit value: 0
**********write**********
Command: /usr/bin/muscle -in /opt/job/P11362/P11362/P11362_23.fasta -clw -out /opt/job/P11362/P11362/P11362_23.aln
Exit value: 0


***** End JET analysis ******
